Algorithm-based prediction of HIV-1 subtype D coreceptor use.

نویسندگان

  • Julia Dina
  • Stephanie Raymond
  • Anne Maillard
  • Helene Le Guillou-Guillemette
  • Audrey Rodalec
  • Agnes Beby-Defaux
  • Genevieve Giraudeau
  • Sophie Vallet
  • Thomas Mourez
  • Christopher Payan
  • Astrid Vabret
  • Annick Ruffault
  • Virginie Ferre
  • Jacques Izopet
  • Jean-Christophe Plantier
چکیده

We compared the coreceptor tropism-predicting performance of a specific genotypic algorithm for HIV-1 subtype D and that of the geno2pheno algorithm with different cutoffs. The D-specific algorithm and geno2pheno with a false-positivity rate cutoff of 2.5% had the same concordance with the phenotypic determination. The geno2pheno algorithm with a false-positivity rate cutoff of 2.5%, more sensitive but slightly less specific, seems to be an appropriate alternative.

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عنوان ژورنال:
  • Journal of clinical microbiology

دوره 51 9  شماره 

صفحات  -

تاریخ انتشار 2013